Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcs1Q8JZK9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Gm7514-201ENSMUST00000209475 934 ntBASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hmgcs1Q8JZK9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgcs1Q8JZK9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Gm18284-201ENSMUST00000172604 624 ntBASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmgcs1Q8JZK9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Gm42642-201ENSMUST00000200683 355 ntBASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgcs1Q8JZK9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgcs1Q8JZK9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgcs1Q8JZK9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms