Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Smc4Q8CG47 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
Smc4Q8CG47 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc4Q8CG47 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc4Q8CG47 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smc4Q8CG47 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Smc4Q8CG47 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Smc4Q8CG47 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC22.26■■□□□ 1.15
Smc4Q8CG47 AC124581.1-201ENSMUST00000225416 1399 ntBASIC22.25■■□□□ 1.15
Smc4Q8CG47 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Mir6982-201ENSMUST00000184354 68 ntBASIC22.25■■□□□ 1.15
Smc4Q8CG47 Gm43183-201ENSMUST00000200632 547 ntBASIC22.25■■□□□ 1.15
Smc4Q8CG47 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Smc4Q8CG47 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.24■■□□□ 1.15
Smc4Q8CG47 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Smc4Q8CG47 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.23■■□□□ 1.15
Smc4Q8CG47 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.23■■□□□ 1.15
Smc4Q8CG47 Gm42545-201ENSMUST00000202755 922 ntBASIC22.23■■□□□ 1.15
Smc4Q8CG47 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc4Q8CG47 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Smc4Q8CG47 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc4Q8CG47 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc4Q8CG47 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.22■■□□□ 1.15
Smc4Q8CG47 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc4Q8CG47 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Smc4Q8CG47 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.22■■□□□ 1.15
Smc4Q8CG47 Gm715-201ENSMUST00000117865 831 ntBASIC22.22■■□□□ 1.15
Smc4Q8CG47 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.22■■□□□ 1.15
Smc4Q8CG47 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Smc4Q8CG47 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc4Q8CG47 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.22■■□□□ 1.15
Smc4Q8CG47 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc4Q8CG47 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Gm29241-201ENSMUST00000189260 1096 ntBASIC22.21■■□□□ 1.15
Smc4Q8CG47 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.21■■□□□ 1.15
Smc4Q8CG47 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc4Q8CG47 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc4Q8CG47 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc4Q8CG47 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc4Q8CG47 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Smc4Q8CG47 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc4Q8CG47 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms