Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Smc5Q8CG46 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC22.39■■□□□ 1.18
Smc5Q8CG46 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.39■■□□□ 1.18
Smc5Q8CG46 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc5Q8CG46 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
Smc5Q8CG46 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc5Q8CG46 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc5Q8CG46 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc5Q8CG46 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc5Q8CG46 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc5Q8CG46 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc5Q8CG46 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc5Q8CG46 Gm6420-201ENSMUST00000193885 723 ntBASIC22.38■■□□□ 1.17
Smc5Q8CG46 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.37■■□□□ 1.17
Smc5Q8CG46 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc5Q8CG46 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Nespas-201ENSMUST00000143738 1083 ntBASIC22.35■■□□□ 1.17
Smc5Q8CG46 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc5Q8CG46 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Smc5Q8CG46 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Gm43338-201ENSMUST00000198617 2223 ntBASIC22.34■■□□□ 1.17
Smc5Q8CG46 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc5Q8CG46 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc5Q8CG46 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC22.33■■□□□ 1.17
Smc5Q8CG46 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
Smc5Q8CG46 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc5Q8CG46 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc5Q8CG46 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc5Q8CG46 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Smc5Q8CG46 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc5Q8CG46 Gm43808-201ENSMUST00000202534 2065 ntBASIC22.33■■□□□ 1.17
Smc5Q8CG46 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc5Q8CG46 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC22.32■■□□□ 1.16
Smc5Q8CG46 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc5Q8CG46 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC22.32■■□□□ 1.16
Smc5Q8CG46 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc5Q8CG46 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.32■■□□□ 1.16
Smc5Q8CG46 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.32■■□□□ 1.16
Smc5Q8CG46 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC22.32■■□□□ 1.16
Smc5Q8CG46 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Smc5Q8CG46 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc5Q8CG46 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Smc5Q8CG46 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc5Q8CG46 Gm37519-201ENSMUST00000191687 2210 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms