Protein–RNA interactions for Protein: Q8CDT9

4933402N03Rik, MCG1612, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933402N03RikQ8CDT9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
4933402N03RikQ8CDT9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Gm42642-201ENSMUST00000200683 355 ntBASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Gm7514-201ENSMUST00000209475 934 ntBASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Gm10033-202ENSMUST00000211874 928 ntBASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
4933402N03RikQ8CDT9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
4933402N03RikQ8CDT9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.23■□□□□ 0.19
4933402N03RikQ8CDT9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
4933402N03RikQ8CDT9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
4933402N03RikQ8CDT9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
4933402N03RikQ8CDT9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
4933402N03RikQ8CDT9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
4933402N03RikQ8CDT9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms