Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim9Q8C7M3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim9Q8C7M3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim9Q8C7M3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.94■□□□□ 0.78
Trim9Q8C7M3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.94■□□□□ 0.78
Trim9Q8C7M3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim9Q8C7M3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim9Q8C7M3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim9Q8C7M3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim9Q8C7M3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Trim9Q8C7M3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim9Q8C7M3 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.93■□□□□ 0.78
Trim9Q8C7M3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim9Q8C7M3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim9Q8C7M3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim9Q8C7M3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim9Q8C7M3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Gm38285-201ENSMUST00000192928 922 ntBASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.91■□□□□ 0.78
Trim9Q8C7M3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim9Q8C7M3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim9Q8C7M3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim9Q8C7M3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim9Q8C7M3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.89■□□□□ 0.77
Trim9Q8C7M3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim9Q8C7M3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim9Q8C7M3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim9Q8C7M3 Zfp783-201ENSMUST00000095946 670 ntBASIC19.89■□□□□ 0.77
Trim9Q8C7M3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim9Q8C7M3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Gm10602-201ENSMUST00000098239 609 ntBASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim9Q8C7M3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim9Q8C7M3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms