Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Gm42778-201ENSMUST00000199644 553 ntBASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smim4Q8C1Q6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smim4Q8C1Q6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smim4Q8C1Q6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smim4Q8C1Q6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smim4Q8C1Q6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smim4Q8C1Q6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms