Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Sfr1Q8BP27 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sfr1Q8BP27 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sfr1Q8BP27 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sfr1Q8BP27 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Gm2399-201ENSMUST00000104944 225 ntBASIC18.33■□□□□ 0.52
Sfr1Q8BP27 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Gm2559-201ENSMUST00000201323 363 ntBASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sfr1Q8BP27 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sfr1Q8BP27 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Gm20049-201ENSMUST00000219950 730 ntBASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.31■□□□□ 0.52
Sfr1Q8BP27 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sfr1Q8BP27 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Grk6-206ENSMUST00000224995 2971 ntBASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sfr1Q8BP27 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sfr1Q8BP27 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms