Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Gm43183-201ENSMUST00000200632 547 ntBASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp1Q8BJQ2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Usp1Q8BJQ2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.14■□□□□ 0.66
Usp1Q8BJQ2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
Usp1Q8BJQ2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Gm18025-201ENSMUST00000221733 862 ntBASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Gm5417-201ENSMUST00000079706 384 ntBASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp1Q8BJQ2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Rarb-207ENSMUST00000225921 2756 ntBASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp1Q8BJQ2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp1Q8BJQ2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp1Q8BJQ2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Mir6349-201ENSMUST00000184059 97 ntBASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Gm21814-202ENSMUST00000203277 873 ntBASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Gm9987-201ENSMUST00000069768 567 ntBASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp1Q8BJQ2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp1Q8BJQ2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms