Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrtm4Q80XG9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrtm4Q80XG9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lrrtm4Q80XG9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrtm4Q80XG9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrtm4Q80XG9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrtm4Q80XG9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lrrtm4Q80XG9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrrtm4Q80XG9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrtm4Q80XG9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrrtm4Q80XG9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrrtm4Q80XG9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrrtm4Q80XG9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrtm4Q80XG9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrtm4Q80XG9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrtm4Q80XG9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrtm4Q80XG9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrrtm4Q80XG9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrtm4Q80XG9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrtm4Q80XG9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrtm4Q80XG9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms