Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim36Q80WG7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim36Q80WG7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim36Q80WG7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim36Q80WG7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim36Q80WG7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim36Q80WG7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.44■□□□□ 0.38
Trim36Q80WG7 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.44■□□□□ 0.38
Trim36Q80WG7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.44■□□□□ 0.38
Trim36Q80WG7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim36Q80WG7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim36Q80WG7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim36Q80WG7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim36Q80WG7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Gm38205-201ENSMUST00000192243 258 ntBASIC17.43■□□□□ 0.38
Trim36Q80WG7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.43■□□□□ 0.38
Trim36Q80WG7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.43■□□□□ 0.38
Trim36Q80WG7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.43■□□□□ 0.38
Trim36Q80WG7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim36Q80WG7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim36Q80WG7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim36Q80WG7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.42■□□□□ 0.38
Trim36Q80WG7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim36Q80WG7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim36Q80WG7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Gm7514-201ENSMUST00000209475 934 ntBASIC17.41■□□□□ 0.38
Trim36Q80WG7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim36Q80WG7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim36Q80WG7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim36Q80WG7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Trim36Q80WG7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trim36Q80WG7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.39■□□□□ 0.37
Trim36Q80WG7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.39■□□□□ 0.37
Trim36Q80WG7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms