Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prpf40bQ80W14 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prpf40bQ80W14 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Gm6659-201ENSMUST00000174752 547 ntBASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Gm30025-201ENSMUST00000218555 728 ntBASIC20.79■□□□□ 0.92
Prpf40bQ80W14 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prpf40bQ80W14 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Prpf40bQ80W14 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Prpf40bQ80W14 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Prpf40bQ80W14 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Prpf40bQ80W14 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prpf40bQ80W14 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.75■□□□□ 0.91
Prpf40bQ80W14 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf40bQ80W14 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms