Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubfd1Q78JW9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubfd1Q78JW9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubfd1Q78JW9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.55■□□□□ 0.4
Ubfd1Q78JW9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Ubfd1Q78JW9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.53■□□□□ 0.4
Ubfd1Q78JW9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms