Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.96■□□□□ 0.31
Sox17Q61473 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox17Q61473 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox17Q61473 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox17Q61473 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox17Q61473 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Sox17Q61473 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Sox17Q61473 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox17Q61473 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sox17Q61473 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.95■□□□□ 0.3
Sox17Q61473 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.95■□□□□ 0.3
Sox17Q61473 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.95■□□□□ 0.3
Sox17Q61473 Gm38205-201ENSMUST00000192243 258 ntBASIC16.95■□□□□ 0.3
Sox17Q61473 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sox17Q61473 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.95■□□□□ 0.3
Sox17Q61473 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox17Q61473 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.94■□□□□ 0.3
Sox17Q61473 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sox17Q61473 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox17Q61473 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox17Q61473 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sox17Q61473 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.93■□□□□ 0.3
Sox17Q61473 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sox17Q61473 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sox17Q61473 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Sox17Q61473 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox17Q61473 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox17Q61473 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox17Q61473 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox17Q61473 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.92■□□□□ 0.3
Sox17Q61473 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Sox17Q61473 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.92■□□□□ 0.3
Sox17Q61473 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.92■□□□□ 0.3
Sox17Q61473 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sox17Q61473 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox17Q61473 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Sox17Q61473 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox17Q61473 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sox17Q61473 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Sox17Q61473 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox17Q61473 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms