Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.64■□□□□ 0.25
Clcn4Q61418 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.64■□□□□ 0.25
Clcn4Q61418 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.64■□□□□ 0.25
Clcn4Q61418 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Clcn4Q61418 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clcn4Q61418 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn4Q61418 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.63■□□□□ 0.25
Clcn4Q61418 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcn4Q61418 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.63■□□□□ 0.25
Clcn4Q61418 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.63■□□□□ 0.25
Clcn4Q61418 Gm7514-201ENSMUST00000209475 934 ntBASIC16.63■□□□□ 0.25
Clcn4Q61418 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcn4Q61418 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn4Q61418 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.62■□□□□ 0.25
Clcn4Q61418 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 Gm13146-201ENSMUST00000118508 780 ntBASIC16.62■□□□□ 0.25
Clcn4Q61418 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clcn4Q61418 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.62■□□□□ 0.25
Clcn4Q61418 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clcn4Q61418 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn4Q61418 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.61■□□□□ 0.25
Clcn4Q61418 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clcn4Q61418 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Clcn4Q61418 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clcn4Q61418 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.61■□□□□ 0.25
Clcn4Q61418 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.61■□□□□ 0.25
Clcn4Q61418 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clcn4Q61418 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcn4Q61418 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.61■□□□□ 0.25
Clcn4Q61418 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.6■□□□□ 0.25
Clcn4Q61418 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.6■□□□□ 0.25
Clcn4Q61418 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clcn4Q61418 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.6■□□□□ 0.25
Clcn4Q61418 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcn4Q61418 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms