Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Trav7-2Q5R1I3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.44□□□□□ -0.26
Trav7-2Q5R1I3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Fst-202ENSMUST00000223640 2612 ntBASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trav7-2Q5R1I3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Gm42642-201ENSMUST00000200683 355 ntBASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7-2Q5R1I3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Gm13534-201ENSMUST00000121169 513 ntBASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7-2Q5R1I3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7-2Q5R1I3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7-2Q5R1I3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7-2Q5R1I3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav7-2Q5R1I3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7-2Q5R1I3 Gm8495-201ENSMUST00000188740 694 ntBASIC13.4□□□□□ -0.26
Trav7-2Q5R1I3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7-2Q5R1I3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7-2Q5R1I3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms