Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-3Q5R1E6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-3Q5R1E6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Gm10493-201ENSMUST00000097270 612 ntBASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-3Q5R1E6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-3Q5R1E6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-3Q5R1E6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Gm6420-201ENSMUST00000193885 723 ntBASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-3Q5R1E6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms