Protein–RNA interactions for Protein: Q4VA36

Ccdc84, Coiled-coil domain-containing protein 84, mousemouse

Known RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84Q4VA36 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc84Q4VA36 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc84Q4VA36 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Gm12382-201ENSMUST00000122005 922 ntBASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc84Q4VA36 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc84Q4VA36 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc84Q4VA36 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Odf3b-204ENSMUST00000227834 930 ntBASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc84Q4VA36 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc84Q4VA36 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc84Q4VA36 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc84Q4VA36 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc84Q4VA36 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc84Q4VA36 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc84Q4VA36 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc84Q4VA36 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms