Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne3Q4FZC9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Syne3Q4FZC9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.18■□□□□ 0.66
Syne3Q4FZC9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Syne3Q4FZC9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Gm6211-202ENSMUST00000167849 925 ntBASIC19.16■□□□□ 0.66
Syne3Q4FZC9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syne3Q4FZC9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.15■□□□□ 0.66
Syne3Q4FZC9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syne3Q4FZC9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Syne3Q4FZC9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Syne3Q4FZC9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Syne3Q4FZC9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syne3Q4FZC9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syne3Q4FZC9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syne3Q4FZC9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Syne3Q4FZC9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.14■□□□□ 0.65
Syne3Q4FZC9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Syne3Q4FZC9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.13■□□□□ 0.65
Syne3Q4FZC9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Syne3Q4FZC9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms