Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gbx1P82976 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Gbx1P82976 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.95■□□□□ 0.3
Gbx1P82976 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gbx1P82976 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gbx1P82976 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Gbx1P82976 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Gbx1P82976 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gbx1P82976 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gbx1P82976 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gbx1P82976 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gbx1P82976 Gm22325-201ENSMUST00000158904 308 ntBASIC16.94■□□□□ 0.3
Gbx1P82976 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.94■□□□□ 0.3
Gbx1P82976 Gm42642-201ENSMUST00000200683 355 ntBASIC16.94■□□□□ 0.3
Gbx1P82976 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gbx1P82976 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gbx1P82976 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gbx1P82976 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gbx1P82976 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gbx1P82976 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gbx1P82976 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.93■□□□□ 0.3
Gbx1P82976 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gbx1P82976 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gbx1P82976 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.93■□□□□ 0.3
Gbx1P82976 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.93■□□□□ 0.3
Gbx1P82976 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
Gbx1P82976 Gm18671-201ENSMUST00000214826 683 ntBASIC16.93■□□□□ 0.3
Gbx1P82976 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.93■□□□□ 0.3
Gbx1P82976 Gm5874-201ENSMUST00000096101 508 ntBASIC16.93■□□□□ 0.3
Gbx1P82976 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gbx1P82976 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gbx1P82976 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gbx1P82976 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gbx1P82976 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gbx1P82976 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gbx1P82976 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.93■□□□□ 0.3
Gbx1P82976 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gbx1P82976 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gbx1P82976 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.92■□□□□ 0.3
Gbx1P82976 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Gbx1P82976 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Gbx1P82976 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.92■□□□□ 0.3
Gbx1P82976 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Gbx1P82976 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gbx1P82976 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.92■□□□□ 0.3
Gbx1P82976 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.91■□□□□ 0.3
Gbx1P82976 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.91■□□□□ 0.3
Gbx1P82976 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.91■□□□□ 0.3
Gbx1P82976 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Gbx1P82976 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.91■□□□□ 0.3
Gbx1P82976 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gbx1P82976 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gbx1P82976 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gbx1P82976 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gbx1P82976 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gbx1P82976 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gbx1P82976 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gbx1P82976 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gbx1P82976 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Gbx1P82976 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gbx1P82976 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gbx1P82976 AV356131-201ENSMUST00000206201 750 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms