Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MIR7108-201ENST00000614319 87 ntBASIC16.29■□□□□ 0.2
CCL20P78556 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.29■□□□□ 0.2
CCL20P78556 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL20P78556 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCL20P78556 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL20P78556 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL20P78556 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL20P78556 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CCL20P78556 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL20P78556 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCL20P78556 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL20P78556 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCL20P78556 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL20P78556 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCL20P78556 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL20P78556 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCL20P78556 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL20P78556 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL20P78556 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 RNF126P1-201ENST00000567452 1320 ntBASIC16.28■□□□□ 0.2
CCL20P78556 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL20P78556 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCL20P78556 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCL20P78556 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL20P78556 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL20P78556 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL20P78556 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL20P78556 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL20P78556 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL20P78556 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL20P78556 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL20P78556 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL20P78556 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL20P78556 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL20P78556 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL20P78556 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL20P78556 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL20P78556 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL20P78556 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL20P78556 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL20P78556 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL20P78556 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL20P78556 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL20P78556 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL20P78556 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL20P78556 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCL20P78556 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CCL20P78556 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL20P78556 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CCL20P78556 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL20P78556 MIR6722-201ENST00000617286 78 ntBASIC16.26■□□□□ 0.19
CCL20P78556 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCL20P78556 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 AC005082.1-201ENST00000413042 2259 ntBASIC16.26■□□□□ 0.19
CCL20P78556 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL20P78556 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL20P78556 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL20P78556 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCL20P78556 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL20P78556 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 AC005332.7-201ENST00000614046 2005 ntBASIC16.25■□□□□ 0.19
CCL20P78556 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms