Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ThraP63058 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.26■□□□□ 0.51
ThraP63058 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ThraP63058 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ThraP63058 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ThraP63058 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ThraP63058 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ThraP63058 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ThraP63058 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.26■□□□□ 0.51
ThraP63058 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.25■□□□□ 0.51
ThraP63058 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.25■□□□□ 0.51
ThraP63058 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.25■□□□□ 0.51
ThraP63058 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.25■□□□□ 0.51
ThraP63058 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ThraP63058 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.24■□□□□ 0.51
ThraP63058 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Gm13168-201ENSMUST00000121771 632 ntBASIC18.24■□□□□ 0.51
ThraP63058 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.24■□□□□ 0.51
ThraP63058 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.24■□□□□ 0.51
ThraP63058 Gm37856-201ENSMUST00000191634 999 ntBASIC18.24■□□□□ 0.51
ThraP63058 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.24■□□□□ 0.51
ThraP63058 Rab3c-203ENSMUST00000224180 967 ntBASIC18.24■□□□□ 0.51
ThraP63058 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ThraP63058 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
ThraP63058 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.24■□□□□ 0.51
ThraP63058 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.23■□□□□ 0.51
ThraP63058 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ThraP63058 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ThraP63058 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ThraP63058 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ThraP63058 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ThraP63058 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ThraP63058 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.23■□□□□ 0.51
ThraP63058 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ThraP63058 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ThraP63058 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ThraP63058 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ThraP63058 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.23■□□□□ 0.51
ThraP63058 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ThraP63058 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ThraP63058 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.22■□□□□ 0.51
ThraP63058 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ThraP63058 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ThraP63058 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.21■□□□□ 0.51
ThraP63058 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ThraP63058 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ThraP63058 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ThraP63058 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ThraP63058 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ThraP63058 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ThraP63058 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ThraP63058 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ThraP63058 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ThraP63058 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ThraP63058 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ThraP63058 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.2■□□□□ 0.5
ThraP63058 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ThraP63058 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms