Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne2P59108 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne2P59108 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne2P59108 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cpne2P59108 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne2P59108 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne2P59108 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.23■□□□□ 0.03
Cpne2P59108 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cpne2P59108 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.23■□□□□ 0.03
Cpne2P59108 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.23■□□□□ 0.03
Cpne2P59108 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.23■□□□□ 0.03
Cpne2P59108 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cpne2P59108 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cpne2P59108 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne2P59108 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.22■□□□□ 0.03
Cpne2P59108 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.22■□□□□ 0.03
Cpne2P59108 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.22■□□□□ 0.03
Cpne2P59108 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cpne2P59108 Gm12821-201ENSMUST00000120022 600 ntBASIC15.22■□□□□ 0.03
Cpne2P59108 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.22■□□□□ 0.03
Cpne2P59108 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.22■□□□□ 0.03
Cpne2P59108 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne2P59108 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cpne2P59108 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Cpne2P59108 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpne2P59108 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cpne2P59108 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cpne2P59108 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpne2P59108 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.21■□□□□ 0.03
Cpne2P59108 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne2P59108 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpne2P59108 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpne2P59108 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.21■□□□□ 0.02
Cpne2P59108 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cpne2P59108 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.2■□□□□ 0.02
Cpne2P59108 Gm8493-201ENSMUST00000196881 489 ntBASIC15.2■□□□□ 0.02
Cpne2P59108 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.2■□□□□ 0.02
Cpne2P59108 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.2■□□□□ 0.02
Cpne2P59108 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cpne2P59108 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Cpne2P59108 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne2P59108 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.2■□□□□ 0.02
Cpne2P59108 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Gm11421-201ENSMUST00000122124 294 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms