Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm1P58771 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.18■□□□□ 0.82
Tpm1P58771 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm1P58771 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm1P58771 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tpm1P58771 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm1P58771 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm1P58771 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm1P58771 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tpm1P58771 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.18■□□□□ 0.82
Tpm1P58771 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tpm1P58771 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tpm1P58771 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.17■□□□□ 0.82
Tpm1P58771 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tpm1P58771 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.16■□□□□ 0.82
Tpm1P58771 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm1P58771 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm1P58771 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm1P58771 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm1P58771 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.16■□□□□ 0.82
Tpm1P58771 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.16■□□□□ 0.82
Tpm1P58771 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm1P58771 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tpm1P58771 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tpm1P58771 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tpm1P58771 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Tpm1P58771 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.15■□□□□ 0.82
Tpm1P58771 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.15■□□□□ 0.82
Tpm1P58771 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.15■□□□□ 0.82
Tpm1P58771 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tpm1P58771 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tpm1P58771 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.14■□□□□ 0.81
Tpm1P58771 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Tpm1P58771 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tpm1P58771 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tpm1P58771 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tpm1P58771 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tpm1P58771 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Tpm1P58771 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tpm1P58771 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tpm1P58771 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tpm1P58771 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.13■□□□□ 0.81
Tpm1P58771 Mir7075-201ENSMUST00000184187 82 ntBASIC20.13■□□□□ 0.81
Tpm1P58771 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tpm1P58771 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tpm1P58771 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tpm1P58771 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tpm1P58771 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Tpm1P58771 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tpm1P58771 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Tpm1P58771 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.12■□□□□ 0.81
Tpm1P58771 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Tpm1P58771 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.12■□□□□ 0.81
Tpm1P58771 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Tpm1P58771 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.12■□□□□ 0.81
Tpm1P58771 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Tpm1P58771 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tpm1P58771 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.11■□□□□ 0.81
Tpm1P58771 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tpm1P58771 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.11■□□□□ 0.81
Tpm1P58771 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tpm1P58771 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms