Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.39■□□□□ 0.05
Hmga2P52927 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Hmga2P52927 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Hmga2P52927 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.39■□□□□ 0.05
Hmga2P52927 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.39■□□□□ 0.05
Hmga2P52927 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hmga2P52927 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmga2P52927 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hmga2P52927 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.38■□□□□ 0.05
Hmga2P52927 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hmga2P52927 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hmga2P52927 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.38■□□□□ 0.05
Hmga2P52927 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmga2P52927 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmga2P52927 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.37■□□□□ 0.05
Hmga2P52927 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmga2P52927 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmga2P52927 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.37■□□□□ 0.05
Hmga2P52927 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmga2P52927 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Hmga2P52927 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmga2P52927 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.37■□□□□ 0.05
Hmga2P52927 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hmga2P52927 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hmga2P52927 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.37■□□□□ 0.05
Hmga2P52927 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.36■□□□□ 0.05
Hmga2P52927 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hmga2P52927 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Hmga2P52927 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
Hmga2P52927 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Hmga2P52927 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Hmga2P52927 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Gm8493-201ENSMUST00000196881 489 ntBASIC15.36■□□□□ 0.05
Hmga2P52927 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.36■□□□□ 0.05
Hmga2P52927 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Hmga2P52927 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hmga2P52927 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.36■□□□□ 0.05
Hmga2P52927 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.36■□□□□ 0.05
Hmga2P52927 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.35■□□□□ 0.05
Hmga2P52927 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.35■□□□□ 0.05
Hmga2P52927 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.35■□□□□ 0.05
Hmga2P52927 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.35■□□□□ 0.05
Hmga2P52927 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Hmga2P52927 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Hmga2P52927 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.35■□□□□ 0.05
Hmga2P52927 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.35■□□□□ 0.05
Hmga2P52927 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmga2P52927 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Hmga2P52927 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms