Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh2P43247 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh2P43247 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Msh2P43247 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.61■□□□□ 0.57
Msh2P43247 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Msh2P43247 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.61■□□□□ 0.57
Msh2P43247 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.61■□□□□ 0.57
Msh2P43247 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh2P43247 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.61■□□□□ 0.57
Msh2P43247 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh2P43247 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh2P43247 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh2P43247 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh2P43247 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh2P43247 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh2P43247 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.6■□□□□ 0.57
Msh2P43247 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh2P43247 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.6■□□□□ 0.57
Msh2P43247 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.6■□□□□ 0.57
Msh2P43247 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh2P43247 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh2P43247 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh2P43247 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh2P43247 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.59■□□□□ 0.57
Msh2P43247 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Msh2P43247 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh2P43247 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh2P43247 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh2P43247 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh2P43247 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Msh2P43247 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh2P43247 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Msh2P43247 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh2P43247 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh2P43247 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh2P43247 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh2P43247 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh2P43247 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh2P43247 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Msh2P43247 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh2P43247 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Msh2P43247 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Msh2P43247 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.58■□□□□ 0.56
Msh2P43247 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Msh2P43247 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh2P43247 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh2P43247 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh2P43247 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh2P43247 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh2P43247 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Msh2P43247 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Msh2P43247 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.57■□□□□ 0.56
Msh2P43247 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.57■□□□□ 0.56
Msh2P43247 Gm7514-201ENSMUST00000209475 934 ntBASIC18.57■□□□□ 0.56
Msh2P43247 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Msh2P43247 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.57■□□□□ 0.56
Msh2P43247 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh2P43247 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Msh2P43247 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Msh2P43247 Gm13534-201ENSMUST00000121169 513 ntBASIC18.56■□□□□ 0.56
Msh2P43247 Gm27405-201ENSMUST00000184201 112 ntBASIC18.56■□□□□ 0.56
Msh2P43247 Gm8969-201ENSMUST00000199694 526 ntBASIC18.56■□□□□ 0.56
Msh2P43247 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh2P43247 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh2P43247 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh2P43247 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh2P43247 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh2P43247 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh2P43247 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Msh2P43247 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.54■□□□□ 0.56
Msh2P43247 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.54■□□□□ 0.56
Msh2P43247 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.54■□□□□ 0.56
Msh2P43247 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Gm7291-201ENSMUST00000199147 382 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms