Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sox5P35710 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sox5P35710 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.74■□□□□ 0.75
Sox5P35710 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.74■□□□□ 0.75
Sox5P35710 Gm8969-201ENSMUST00000199694 526 ntBASIC19.74■□□□□ 0.75
Sox5P35710 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox5P35710 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
Sox5P35710 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sox5P35710 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox5P35710 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sox5P35710 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.73■□□□□ 0.75
Sox5P35710 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox5P35710 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sox5P35710 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox5P35710 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox5P35710 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox5P35710 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.73■□□□□ 0.75
Sox5P35710 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox5P35710 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox5P35710 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.73■□□□□ 0.75
Sox5P35710 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox5P35710 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox5P35710 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox5P35710 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox5P35710 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.72■□□□□ 0.75
Sox5P35710 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox5P35710 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox5P35710 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Sox5P35710 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox5P35710 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sox5P35710 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Sox5P35710 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sox5P35710 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.71■□□□□ 0.75
Sox5P35710 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Sox5P35710 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Sox5P35710 Gm22325-201ENSMUST00000158904 308 ntBASIC19.71■□□□□ 0.75
Sox5P35710 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.71■□□□□ 0.75
Sox5P35710 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sox5P35710 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox5P35710 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.7■□□□□ 0.74
Sox5P35710 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox5P35710 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Sox5P35710 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.69■□□□□ 0.74
Sox5P35710 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.69■□□□□ 0.74
Sox5P35710 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox5P35710 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Sox5P35710 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.68■□□□□ 0.74
Sox5P35710 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox5P35710 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms