Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BdnfP21237 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.28■□□□□ 0.36
BdnfP21237 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
BdnfP21237 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.28■□□□□ 0.36
BdnfP21237 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
BdnfP21237 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
BdnfP21237 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
BdnfP21237 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.28■□□□□ 0.36
BdnfP21237 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
BdnfP21237 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BdnfP21237 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.28■□□□□ 0.36
BdnfP21237 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BdnfP21237 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
BdnfP21237 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.27■□□□□ 0.36
BdnfP21237 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BdnfP21237 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BdnfP21237 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BdnfP21237 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.26■□□□□ 0.35
BdnfP21237 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
BdnfP21237 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.26■□□□□ 0.35
BdnfP21237 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.26■□□□□ 0.35
BdnfP21237 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
BdnfP21237 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.26■□□□□ 0.35
BdnfP21237 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BdnfP21237 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.25■□□□□ 0.35
BdnfP21237 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
BdnfP21237 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Gm13146-201ENSMUST00000118508 780 ntBASIC17.25■□□□□ 0.35
BdnfP21237 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.25■□□□□ 0.35
BdnfP21237 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BdnfP21237 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BdnfP21237 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.25■□□□□ 0.35
BdnfP21237 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Tgds-204ENSMUST00000228543 1594 ntBASIC17.24■□□□□ 0.35
BdnfP21237 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.24■□□□□ 0.35
BdnfP21237 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.24■□□□□ 0.35
BdnfP21237 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
BdnfP21237 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
BdnfP21237 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
BdnfP21237 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BdnfP21237 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.23■□□□□ 0.35
BdnfP21237 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BdnfP21237 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BdnfP21237 Gm13234-201ENSMUST00000120010 747 ntBASIC17.23■□□□□ 0.35
BdnfP21237 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BdnfP21237 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BdnfP21237 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms