Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna1P04756 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna1P04756 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna1P04756 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna1P04756 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chrna1P04756 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna1P04756 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna1P04756 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna1P04756 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Chrna1P04756 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna1P04756 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Chrna1P04756 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.46■□□□□ 0.71
Chrna1P04756 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna1P04756 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna1P04756 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna1P04756 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna1P04756 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chrna1P04756 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna1P04756 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna1P04756 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chrna1P04756 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chrna1P04756 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna1P04756 Gm12382-201ENSMUST00000122005 922 ntBASIC19.45■□□□□ 0.7
Chrna1P04756 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Chrna1P04756 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.45■□□□□ 0.7
Chrna1P04756 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna1P04756 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna1P04756 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna1P04756 Gm5417-201ENSMUST00000079706 384 ntBASIC19.45■□□□□ 0.7
Chrna1P04756 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna1P04756 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna1P04756 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.44■□□□□ 0.7
Chrna1P04756 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.44■□□□□ 0.7
Chrna1P04756 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Chrna1P04756 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.44■□□□□ 0.7
Chrna1P04756 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna1P04756 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.43■□□□□ 0.7
Chrna1P04756 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Gm21814-202ENSMUST00000203277 873 ntBASIC19.43■□□□□ 0.7
Chrna1P04756 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna1P04756 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chrna1P04756 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna1P04756 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.42■□□□□ 0.7
Chrna1P04756 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna1P04756 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Chrna1P04756 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.42■□□□□ 0.7
Chrna1P04756 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.41■□□□□ 0.7
Chrna1P04756 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna1P04756 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna1P04756 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna1P04756 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna1P04756 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chrna1P04756 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.41■□□□□ 0.7
Chrna1P04756 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.41■□□□□ 0.7
Chrna1P04756 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chrna1P04756 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna1P04756 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna1P04756 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Chrna1P04756 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.4■□□□□ 0.7
Chrna1P04756 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Chrna1P04756 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.4■□□□□ 0.7
Chrna1P04756 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.4■□□□□ 0.7
Chrna1P04756 Tgds-204ENSMUST00000228543 1594 ntBASIC19.4■□□□□ 0.7
Chrna1P04756 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna1P04756 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chrna1P04756 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chrna1P04756 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.39■□□□□ 0.7
Chrna1P04756 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chrna1P04756 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms