Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Hdac3O88895 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.14■□□□□ 0.17
Hdac3O88895 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hdac3O88895 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.14■□□□□ 0.17
Hdac3O88895 AV356131-201ENSMUST00000206201 750 ntBASIC16.14■□□□□ 0.17
Hdac3O88895 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hdac3O88895 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hdac3O88895 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hdac3O88895 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hdac3O88895 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Hdac3O88895 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Hdac3O88895 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.13■□□□□ 0.17
Hdac3O88895 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.13■□□□□ 0.17
Hdac3O88895 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.13■□□□□ 0.17
Hdac3O88895 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hdac3O88895 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.12■□□□□ 0.17
Hdac3O88895 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.12■□□□□ 0.17
Hdac3O88895 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Gm10849-201ENSMUST00000100397 618 ntBASIC16.12■□□□□ 0.17
Hdac3O88895 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Hdac3O88895 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.12■□□□□ 0.17
Hdac3O88895 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hdac3O88895 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Gm7514-201ENSMUST00000209475 934 ntBASIC16.11■□□□□ 0.17
Hdac3O88895 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Hdac3O88895 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac3O88895 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Hdac3O88895 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Hdac3O88895 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.1■□□□□ 0.17
Hdac3O88895 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.1■□□□□ 0.17
Hdac3O88895 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hdac3O88895 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac3O88895 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hdac3O88895 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.09■□□□□ 0.17
Hdac3O88895 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.09■□□□□ 0.17
Hdac3O88895 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac3O88895 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms