Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.68■□□□□ 0.26
Capns1O88456 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Capns1O88456 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Capns1O88456 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.67■□□□□ 0.26
Capns1O88456 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Capns1O88456 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.67■□□□□ 0.26
Capns1O88456 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.67■□□□□ 0.26
Capns1O88456 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Capns1O88456 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Capns1O88456 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.66■□□□□ 0.26
Capns1O88456 Gm7860-201ENSMUST00000121190 879 ntBASIC16.66■□□□□ 0.26
Capns1O88456 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Capns1O88456 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.66■□□□□ 0.26
Capns1O88456 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Capns1O88456 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Capns1O88456 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Capns1O88456 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.65■□□□□ 0.26
Capns1O88456 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Capns1O88456 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Capns1O88456 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.65■□□□□ 0.26
Capns1O88456 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Capns1O88456 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Capns1O88456 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Capns1O88456 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.64■□□□□ 0.25
Capns1O88456 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.64■□□□□ 0.25
Capns1O88456 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Capns1O88456 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Capns1O88456 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Capns1O88456 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Capns1O88456 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.63■□□□□ 0.25
Capns1O88456 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Capns1O88456 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Gm10602-201ENSMUST00000098239 609 ntBASIC16.63■□□□□ 0.25
Capns1O88456 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Capns1O88456 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.63■□□□□ 0.25
Capns1O88456 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capns1O88456 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Capns1O88456 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capns1O88456 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms