Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdh16O88338 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cdh16O88338 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdh16O88338 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdh16O88338 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cdh16O88338 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cdh16O88338 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdh16O88338 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdh16O88338 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdh16O88338 Mir7075-201ENSMUST00000184187 82 ntBASIC17.68■□□□□ 0.42
Cdh16O88338 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh16O88338 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh16O88338 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh16O88338 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh16O88338 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdh16O88338 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdh16O88338 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdh16O88338 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.67■□□□□ 0.42
Cdh16O88338 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.67■□□□□ 0.42
Cdh16O88338 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Gm12251-201ENSMUST00000117893 792 ntBASIC17.67■□□□□ 0.42
Cdh16O88338 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.67■□□□□ 0.42
Cdh16O88338 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cdh16O88338 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh16O88338 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.67■□□□□ 0.42
Cdh16O88338 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdh16O88338 Gm12821-201ENSMUST00000120022 600 ntBASIC17.66■□□□□ 0.42
Cdh16O88338 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cdh16O88338 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh16O88338 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdh16O88338 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh16O88338 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Cdh16O88338 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.65■□□□□ 0.42
Cdh16O88338 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cdh16O88338 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdh16O88338 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.65■□□□□ 0.42
Cdh16O88338 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cdh16O88338 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh16O88338 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Cdh16O88338 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.64■□□□□ 0.41
Cdh16O88338 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.64■□□□□ 0.41
Cdh16O88338 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdh16O88338 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.64■□□□□ 0.41
Cdh16O88338 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh16O88338 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.64■□□□□ 0.41
Cdh16O88338 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms