Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6dO55057 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6dO55057 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6dO55057 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6dO55057 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pde6dO55057 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.28□□□□□ -0.12
Pde6dO55057 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pde6dO55057 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.28□□□□□ -0.12
Pde6dO55057 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pde6dO55057 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
Pde6dO55057 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6dO55057 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pde6dO55057 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6dO55057 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6dO55057 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6dO55057 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6dO55057 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6dO55057 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6dO55057 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6dO55057 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6dO55057 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pde6dO55057 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.27□□□□□ -0.13
Pde6dO55057 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6dO55057 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.27□□□□□ -0.13
Pde6dO55057 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.27□□□□□ -0.13
Pde6dO55057 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.27□□□□□ -0.13
Pde6dO55057 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.27□□□□□ -0.13
Pde6dO55057 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6dO55057 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6dO55057 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pde6dO55057 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pde6dO55057 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6dO55057 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pde6dO55057 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6dO55057 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.26□□□□□ -0.13
Pde6dO55057 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.26□□□□□ -0.13
Pde6dO55057 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pde6dO55057 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6dO55057 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.26□□□□□ -0.13
Pde6dO55057 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pde6dO55057 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.26□□□□□ -0.13
Pde6dO55057 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6dO55057 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Pde6dO55057 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pde6dO55057 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6dO55057 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Pde6dO55057 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6dO55057 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pde6dO55057 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6dO55057 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.24□□□□□ -0.13
Pde6dO55057 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pde6dO55057 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pde6dO55057 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms