Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.62■□□□□ 0.57
Sdc4O35988 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Sdc4O35988 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.62■□□□□ 0.57
Sdc4O35988 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sdc4O35988 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.62■□□□□ 0.57
Sdc4O35988 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sdc4O35988 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.61■□□□□ 0.57
Sdc4O35988 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.61■□□□□ 0.57
Sdc4O35988 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.61■□□□□ 0.57
Sdc4O35988 Gm15375-201ENSMUST00000119510 849 ntBASIC18.61■□□□□ 0.57
Sdc4O35988 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.61■□□□□ 0.57
Sdc4O35988 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sdc4O35988 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.61■□□□□ 0.57
Sdc4O35988 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sdc4O35988 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sdc4O35988 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.6■□□□□ 0.57
Sdc4O35988 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.6■□□□□ 0.57
Sdc4O35988 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Mir6982-201ENSMUST00000184354 68 ntBASIC18.6■□□□□ 0.57
Sdc4O35988 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.6■□□□□ 0.57
Sdc4O35988 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sdc4O35988 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sdc4O35988 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.59■□□□□ 0.57
Sdc4O35988 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.59■□□□□ 0.57
Sdc4O35988 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.59■□□□□ 0.57
Sdc4O35988 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.59■□□□□ 0.57
Sdc4O35988 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Mir1199-201ENSMUST00000117015 119 ntBASIC18.59■□□□□ 0.57
Sdc4O35988 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.59■□□□□ 0.57
Sdc4O35988 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sdc4O35988 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sdc4O35988 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.58■□□□□ 0.57
Sdc4O35988 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc4O35988 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Sdc4O35988 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc4O35988 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sdc4O35988 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sdc4O35988 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sdc4O35988 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc4O35988 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc4O35988 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc4O35988 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Sdc4O35988 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.57■□□□□ 0.56
Sdc4O35988 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.57■□□□□ 0.56
Sdc4O35988 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.57■□□□□ 0.56
Sdc4O35988 Mir6349-201ENSMUST00000184059 97 ntBASIC18.57■□□□□ 0.56
Sdc4O35988 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Sdc4O35988 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc4O35988 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc4O35988 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc4O35988 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc4O35988 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc4O35988 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc4O35988 Gm715-201ENSMUST00000117865 831 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms