Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.4■□□□□ 0.22
Matn3O35701 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Matn3O35701 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Matn3O35701 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.4■□□□□ 0.22
Matn3O35701 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.4■□□□□ 0.22
Matn3O35701 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Matn3O35701 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.4■□□□□ 0.22
Matn3O35701 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Matn3O35701 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Matn3O35701 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Matn3O35701 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Matn3O35701 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Matn3O35701 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Matn3O35701 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Matn3O35701 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Matn3O35701 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Matn3O35701 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Matn3O35701 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Matn3O35701 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.39■□□□□ 0.21
Matn3O35701 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Gm27454-201ENSMUST00000185090 204 ntBASIC16.39■□□□□ 0.21
Matn3O35701 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Matn3O35701 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Matn3O35701 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.38■□□□□ 0.21
Matn3O35701 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Matn3O35701 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Matn3O35701 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Matn3O35701 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Matn3O35701 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Matn3O35701 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Matn3O35701 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Matn3O35701 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.37■□□□□ 0.21
Matn3O35701 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.37■□□□□ 0.21
Matn3O35701 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.37■□□□□ 0.21
Matn3O35701 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Matn3O35701 Tgds-204ENSMUST00000228543 1594 ntBASIC16.37■□□□□ 0.21
Matn3O35701 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Matn3O35701 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Matn3O35701 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.37■□□□□ 0.21
Matn3O35701 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.37■□□□□ 0.21
Matn3O35701 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Matn3O35701 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Matn3O35701 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Matn3O35701 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.36■□□□□ 0.21
Matn3O35701 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Matn3O35701 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms