Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Phox2bO35690 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Phox2bO35690 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Phox2bO35690 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.08■□□□□ 0.48
Phox2bO35690 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Phox2bO35690 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.08■□□□□ 0.48
Phox2bO35690 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Phox2bO35690 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 AA386476-201ENSMUST00000098781 1665 ntBASIC18.07■□□□□ 0.48
Phox2bO35690 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Gm45058-201ENSMUST00000205810 766 ntBASIC18.07■□□□□ 0.48
Phox2bO35690 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Phox2bO35690 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Phox2bO35690 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Phox2bO35690 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Phox2bO35690 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Phox2bO35690 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Phox2bO35690 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Phox2bO35690 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.06■□□□□ 0.48
Phox2bO35690 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Phox2bO35690 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Phox2bO35690 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Phox2bO35690 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Phox2bO35690 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Phox2bO35690 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Phox2bO35690 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.05■□□□□ 0.48
Phox2bO35690 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.05■□□□□ 0.48
Phox2bO35690 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Phox2bO35690 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Phox2bO35690 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.05■□□□□ 0.48
Phox2bO35690 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Phox2bO35690 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Phox2bO35690 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Phox2bO35690 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Gm27704-201ENSMUST00000185094 107 ntBASIC18.04■□□□□ 0.48
Phox2bO35690 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.04■□□□□ 0.48
Phox2bO35690 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Phox2bO35690 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Phox2bO35690 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Phox2bO35690 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Phox2bO35690 Flg-201ENSMUST00000050758 1488 ntBASIC18.03■□□□□ 0.48
Phox2bO35690 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.03■□□□□ 0.48
Phox2bO35690 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.03■□□□□ 0.48
Phox2bO35690 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Phox2bO35690 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.03■□□□□ 0.48
Phox2bO35690 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.03■□□□□ 0.48
Phox2bO35690 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Phox2bO35690 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Phox2bO35690 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Phox2bO35690 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Phox2bO35690 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Phox2bO35690 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Phox2bO35690 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Phox2bO35690 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Gm17807-201ENSMUST00000186869 298 ntBASIC18.02■□□□□ 0.48
Phox2bO35690 Gm42545-201ENSMUST00000202755 922 ntBASIC18.02■□□□□ 0.48
Phox2bO35690 AW822252-206ENSMUST00000208904 237 ntBASIC18.02■□□□□ 0.48
Phox2bO35690 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Phox2bO35690 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Phox2bO35690 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Phox2bO35690 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Phox2bO35690 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Phox2bO35690 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Phox2bO35690 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms