Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Gm5874-201ENSMUST00000096101 508 ntBASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf11bO08712 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf11bO08712 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf11bO08712 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf11bO08712 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tnfrsf11bO08712 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tnfrsf11bO08712 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 AV356131-201ENSMUST00000206201 750 ntBASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf11bO08712 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf11bO08712 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf11bO08712 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf11bO08712 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf11bO08712 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.31■□□□□ 0.52
Tnfrsf11bO08712 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf11bO08712 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf11bO08712 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf11bO08712 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf11bO08712 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms