Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Zfp783-201ENSMUST00000095946 670 ntBASIC15.3■□□□□ 0.04
Cpsf4lE9Q2N0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Gm12896-201ENSMUST00000118430 226 ntBASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Gm38285-201ENSMUST00000192928 922 ntBASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4lE9Q2N0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Grk6-206ENSMUST00000224995 2971 ntBASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Dio3-201ENSMUST00000097228 1449 ntBASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Gm20049-201ENSMUST00000219950 730 ntBASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4lE9Q2N0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Gm11927-201ENSMUST00000118472 759 ntBASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4lE9Q2N0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4lE9Q2N0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Gm12527-201ENSMUST00000117967 564 ntBASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4lE9Q2N0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms