Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Gm28043E0CXC2 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Gm42778-201ENSMUST00000199644 553 ntBASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28043E0CXC2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Gm8495-201ENSMUST00000188740 694 ntBASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28043E0CXC2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28043E0CXC2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Gm28043E0CXC2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm28043E0CXC2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm28043E0CXC2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm28043E0CXC2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Gm10033-202ENSMUST00000211874 928 ntBASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28043E0CXC2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Gm42642-201ENSMUST00000200683 355 ntBASIC18.07■□□□□ 0.48
Gm28043E0CXC2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm28043E0CXC2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28043E0CXC2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28043E0CXC2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm28043E0CXC2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28043E0CXC2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28043E0CXC2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28043E0CXC2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28043E0CXC2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.06■□□□□ 0.48
Gm28043E0CXC2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms