Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Gm38285-201ENSMUST00000192928 922 ntBASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Gm15378-201ENSMUST00000121894 207 ntBASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc78D3Z5T1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc78D3Z5T1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc78D3Z5T1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc78D3Z5T1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Ccdc78D3Z5T1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc78D3Z5T1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.19■□□□□ 0.82
Ccdc78D3Z5T1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc78D3Z5T1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.18■□□□□ 0.82
Ccdc78D3Z5T1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc78D3Z5T1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms