Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.13■□□□□ 0.65
Rfx8D3YU81 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.13■□□□□ 0.65
Rfx8D3YU81 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.13■□□□□ 0.65
Rfx8D3YU81 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.13■□□□□ 0.65
Rfx8D3YU81 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.12■□□□□ 0.65
Rfx8D3YU81 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Gm44549-201ENSMUST00000208351 577 ntBASIC19.12■□□□□ 0.65
Rfx8D3YU81 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Gm4968-201ENSMUST00000071458 858 ntBASIC19.12■□□□□ 0.65
Rfx8D3YU81 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx8D3YU81 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.11■□□□□ 0.65
Rfx8D3YU81 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.11■□□□□ 0.65
Rfx8D3YU81 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx8D3YU81 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx8D3YU81 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx8D3YU81 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx8D3YU81 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Gm29257-201ENSMUST00000186115 639 ntBASIC19.09■□□□□ 0.65
Rfx8D3YU81 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Rfx8D3YU81 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx8D3YU81 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx8D3YU81 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Rfx8D3YU81 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx8D3YU81 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.08■□□□□ 0.65
Rfx8D3YU81 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx8D3YU81 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Rfx8D3YU81 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Rfx8D3YU81 Gm12441-201ENSMUST00000121806 588 ntBASIC19.08■□□□□ 0.64
Rfx8D3YU81 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx8D3YU81 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx8D3YU81 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.08■□□□□ 0.64
Rfx8D3YU81 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.08■□□□□ 0.64
Rfx8D3YU81 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.08■□□□□ 0.64
Rfx8D3YU81 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.08■□□□□ 0.64
Rfx8D3YU81 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
Rfx8D3YU81 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx8D3YU81 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx8D3YU81 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Gm2399-201ENSMUST00000104944 225 ntBASIC19.07■□□□□ 0.64
Rfx8D3YU81 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx8D3YU81 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms