Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.42■□□□□ 0.22
Smim17A0A504 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smim17A0A504 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.42■□□□□ 0.22
Smim17A0A504 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim17A0A504 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smim17A0A504 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim17A0A504 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim17A0A504 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smim17A0A504 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Smim17A0A504 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smim17A0A504 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smim17A0A504 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.41■□□□□ 0.22
Smim17A0A504 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim17A0A504 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smim17A0A504 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim17A0A504 Haglr-201ENSMUST00000100000 2085 ntBASIC16.41■□□□□ 0.22
Smim17A0A504 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.4■□□□□ 0.22
Smim17A0A504 Serp2-204ENSMUST00000228055 705 ntBASIC16.4■□□□□ 0.22
Smim17A0A504 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.4■□□□□ 0.22
Smim17A0A504 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smim17A0A504 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smim17A0A504 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim17A0A504 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim17A0A504 Gm13238-201ENSMUST00000117655 780 ntBASIC16.39■□□□□ 0.21
Smim17A0A504 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.39■□□□□ 0.21
Smim17A0A504 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.39■□□□□ 0.21
Smim17A0A504 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.39■□□□□ 0.21
Smim17A0A504 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim17A0A504 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smim17A0A504 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.38■□□□□ 0.21
Smim17A0A504 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Smim17A0A504 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Smim17A0A504 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.38■□□□□ 0.21
Smim17A0A504 Gm9870-201ENSMUST00000063874 645 ntBASIC16.38■□□□□ 0.21
Smim17A0A504 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smim17A0A504 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smim17A0A504 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
Smim17A0A504 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Smim17A0A504 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smim17A0A504 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smim17A0A504 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim17A0A504 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim17A0A504 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.36■□□□□ 0.21
Smim17A0A504 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.36■□□□□ 0.21
Smim17A0A504 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim17A0A504 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smim17A0A504 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smim17A0A504 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smim17A0A504 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim17A0A504 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim17A0A504 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim17A0A504 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim17A0A504 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms