Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9d-4A0A0G2JG37 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9d-4A0A0G2JG37 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9d-4A0A0G2JG37 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm14117-201ENSMUST00000122417 843 ntBASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9d-4A0A0G2JG37 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9d-4A0A0G2JG37 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9d-4A0A0G2JG37 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms