Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Rps24-207ENSMUST00000224568 714 ntBASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Serp2-204ENSMUST00000228055 705 ntBASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Golgb1-201ENSMUST00000023534 498 ntBASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav3n-3A0A0G2JEM0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms