Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-7A0A075B6B0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.96□□□□□ -0.18
Trav6d-7A0A075B6B0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-7A0A075B6B0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-7A0A075B6B0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav6d-7A0A075B6B0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Gm12933-201ENSMUST00000120203 872 ntBASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms