Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav18A0A075B656 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav18A0A075B656 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav18A0A075B656 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.8□□□□□ -0.04
Trav18A0A075B656 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Tgds-204ENSMUST00000228543 1594 ntBASIC14.8□□□□□ -0.04
Trav18A0A075B656 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav18A0A075B656 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.79□□□□□ -0.04
Trav18A0A075B656 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.79□□□□□ -0.04
Trav18A0A075B656 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav18A0A075B656 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav18A0A075B656 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav18A0A075B656 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav18A0A075B656 Gm42778-201ENSMUST00000199644 553 ntBASIC14.77□□□□□ -0.05
Trav18A0A075B656 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav18A0A075B656 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav18A0A075B656 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav18A0A075B656 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav18A0A075B656 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav18A0A075B656 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav18A0A075B656 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav18A0A075B656 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav18A0A075B656 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Nespas-201ENSMUST00000143738 1083 ntBASIC14.76□□□□□ -0.05
Trav18A0A075B656 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.76□□□□□ -0.05
Trav18A0A075B656 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav18A0A075B656 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.75□□□□□ -0.05
Trav18A0A075B656 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav18A0A075B656 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms