Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Mir7075-201ENSMUST00000184187 82 ntBASIC14.37□□□□□ -0.11
Trav17A0A075B655 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Trav17A0A075B655 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.37□□□□□ -0.11
Trav17A0A075B655 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.37□□□□□ -0.11
Trav17A0A075B655 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav17A0A075B655 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Gm8969-201ENSMUST00000199694 526 ntBASIC14.36□□□□□ -0.11
Trav17A0A075B655 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.36□□□□□ -0.11
Trav17A0A075B655 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav17A0A075B655 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav17A0A075B655 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trav17A0A075B655 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Gm38205-201ENSMUST00000192243 258 ntBASIC14.35□□□□□ -0.11
Trav17A0A075B655 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.35□□□□□ -0.11
Trav17A0A075B655 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav17A0A075B655 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Tgds-204ENSMUST00000228543 1594 ntBASIC14.34□□□□□ -0.11
Trav17A0A075B655 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav17A0A075B655 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms