Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4n-4A0A075B615 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Gm27502-201ENSMUST00000183495 199 ntBASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4n-4A0A075B615 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4n-4A0A075B615 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4n-4A0A075B615 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4n-4A0A075B615 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms