Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-1A0A075B5S6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv3-1A0A075B5S6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv3-1A0A075B5S6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.33□□□□□ -0.11
Ighv3-1A0A075B5S6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv3-1A0A075B5S6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv3-1A0A075B5S6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv3-1A0A075B5S6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv3-1A0A075B5S6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv3-1A0A075B5S6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv3-1A0A075B5S6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Mir1199-201ENSMUST00000117015 119 ntBASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv3-1A0A075B5S6 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ighv3-1A0A075B5S6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.3□□□□□ -0.12
Ighv3-1A0A075B5S6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.3□□□□□ -0.12
Ighv3-1A0A075B5S6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-1A0A075B5S6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ighv3-1A0A075B5S6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ighv3-1A0A075B5S6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ighv3-1A0A075B5S6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ighv3-1A0A075B5S6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms