Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm12565-201ENSMUST00000119004 649 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm11976-201ENSMUST00000119236 295 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm23632-201ENSMUST00000175289 125 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm2602-201ENSMUST00000202112 571 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm4083-201ENSMUST00000207158 451 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm2225-201ENSMUST00000209570 377 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm9788-201ENSMUST00000057038 906 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm6436-201ENSMUST00000077163 451 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm25133-201ENSMUST00000082647 130 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm38077-201ENSMUST00000193657 3245 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdc40Q9DC48 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms