Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm11501-201ENSMUST00000118039 581 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm11920-201ENSMUST00000118491 563 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm12244-201ENSMUST00000119500 291 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm14945-201ENSMUST00000119556 1118 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm13940-201ENSMUST00000121023 301 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm13459-201ENSMUST00000121558 646 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm2709-201ENSMUST00000142979 350 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm25669-201ENSMUST00000157699 112 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm38149-201ENSMUST00000191943 339 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm37098-201ENSMUST00000192290 244 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm38068-201ENSMUST00000192546 540 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm38395-201ENSMUST00000199904 830 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm17984-201ENSMUST00000205286 859 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm6230-201ENSMUST00000208077 780 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm45279-201ENSMUST00000210315 391 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm4042-201ENSMUST00000216946 637 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Mir3068-201ENSMUST00000083004 136 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Klf5-202ENSMUST00000226784 2852 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm37326-201ENSMUST00000192828 3071 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm37520-201ENSMUST00000194883 2672 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm44165-201ENSMUST00000203093 1469 ntBASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.73□□□□□ -1.33
Nkx6-1Q99MA9 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 AC168056.4-201ENSMUST00000223835 2567 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm26340-201ENSMUST00000102365 99 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm12393-201ENSMUST00000117084 848 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm5387-201ENSMUST00000119776 857 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm5406-201ENSMUST00000120054 766 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm23386-201ENSMUST00000158585 144 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Mir5617-201ENSMUST00000176786 57 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm9274-201ENSMUST00000182505 984 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm5272-201ENSMUST00000182730 982 ntBASIC6.72□□□□□ -1.33
Nkx6-1Q99MA9 Gm28149-201ENSMUST00000187102 378 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms